1 files changed, 25 insertions, 0 deletions
diff --git a/gn3/computations/rqtl.py b/gn3/computations/rqtl.py
new file mode 100644
index 0000000..087a99f
--- /dev/null
+++ b/gn3/computations/rqtl.py
@@ -0,0 +1,25 @@
+"""Procedures related rqtl computations"""
+import os
+
+from typing import Dict
+from gn3.commands import compose_rqtl_cmd
+from gn3.fs_helpers import get_hash_of_files
+
+def generate_rqtl_cmd(rqtl_wrapper_cmd: str,
+                      output_dir: str,
+                      rqtl_wrapper_kwargs: Dict) -> Dict:
+
+    _hash = get_hash_of_files(
+        [v for k, v in rqtl_wrapper_kwargs.items() if k in ["g", "p", "addcovar",
+                                                    "model", "method",
+                                                    "interval", "nperm",
+                                                    "scale", "control"]])
+
+    _output_filename = f"{_hash}-output.json"
+    return {
+        "output_file":
+        _output_filename,
+        "rqtl_cmd":
+        compose_rqtl_cmd(rqtl_wrapper_cmd=rqtl_wrapper_cmd,
+                         rqtl_wrapper_kwargs=rqtl_wrapper_kwargs)
+    }
+\ No newline at end of file