diff options
Diffstat (limited to 'gn3/computations/qtlreaper.py')
| -rw-r--r-- | gn3/computations/qtlreaper.py | 8 |
1 files changed, 7 insertions, 1 deletions
diff --git a/gn3/computations/qtlreaper.py b/gn3/computations/qtlreaper.py index 30c7051..eff2a80 100644 --- a/gn3/computations/qtlreaper.py +++ b/gn3/computations/qtlreaper.py @@ -94,9 +94,15 @@ def parse_reaper_main_results(results_file): with open(results_file, "r") as infile: lines = infile.readlines() + def __parse_column_value(value): + try: + return float(value) + except: + return value + def __parse_line(line): items = line.strip().split("\t") - return items[0:2] + [float(item) for item in items[2:]] + return items[0:2] + [__parse_column_value(item) for item in items[2:]] header = lines[0].strip().split("\t") return [dict(zip(header, __parse_line(line))) for line in lines[1:]] |