diff options
Diffstat (limited to 'gn3/commands.py')
| -rw-r--r-- | gn3/commands.py | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/gn3/commands.py b/gn3/commands.py index 0e78fd2..a90e895 100644 --- a/gn3/commands.py +++ b/gn3/commands.py @@ -14,6 +14,8 @@ from typing import Tuple from typing import Union from typing import Sequence from uuid import uuid4 + +from flask import current_app from redis.client import Redis # Used only in type hinting from gn3.chancy import random_string @@ -80,7 +82,8 @@ def compose_pcorrs_command( prefix_cmd = ( f"{sys.executable}", "-m", "scripts.partial_correlations", - primary_trait, ",".join(control_traits), __parse_method__(method)) + primary_trait, ",".join(control_traits), __parse_method__(method), + current_app.config["SQL_URI"]) if ( kwargs.get("target_database") is not None and kwargs.get("target_traits") is None): |