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-rw-r--r--gn3/api/general.py5
-rw-r--r--gn3/api/metadata.py22
2 files changed, 23 insertions, 4 deletions
diff --git a/gn3/api/general.py b/gn3/api/general.py
index 68b128b..f904ffe 100644
--- a/gn3/api/general.py
+++ b/gn3/api/general.py
@@ -69,7 +69,4 @@ def run_r_qtl(geno_filestr, pheno_filestr):
f"{geno_filestr} {pheno_filestr}")
return jsonify(run_cmd(cmd)), 201
-@general.route("/dataset/<accession_id>")
-def dataset_metadata(accession_id):
- """Return info as JSON for dataset with ACCESSION_ID."""
- return jsonify(rdf.get_dataset_metadata(accession_id).data)
+
diff --git a/gn3/api/metadata.py b/gn3/api/metadata.py
new file mode 100644
index 0000000..4fe9e67
--- /dev/null
+++ b/gn3/api/metadata.py
@@ -0,0 +1,22 @@
+"""API for fetching metadata using an API"""
+from flask import Blueprint
+from flask import jsonify
+from flask import current_app
+
+from SPARQLWrapper import SPARQLWrapper
+
+from gn3.db.rdf import get_dataset_metadata
+
+
+metadata = Blueprint("metadata", __name__)
+
+
+@metadata.route("/dataset/<accession_id>", methods=["GET"])
+def jsonify_dataset_metadata(accession_id):
+ """Fetch a dataset's metadata given it's ACCESSION_ID"""
+ return jsonify(get_dataset_metadata(
+ SPARQLWrapper(current_app
+ .config
+ .get("SPARQL_ENDPOINT")),
+ accession_id
+ ).data)