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-rw-r--r--gn3/api/wiki.py51
1 files changed, 51 insertions, 0 deletions
diff --git a/gn3/api/wiki.py b/gn3/api/wiki.py
new file mode 100644
index 0000000..133d7c8
--- /dev/null
+++ b/gn3/api/wiki.py
@@ -0,0 +1,51 @@
+import datetime
+from flask import Blueprint, request, jsonify, current_app
+from gn3 import db_utils
+
+wiki = Blueprint("wiki", __name__)
+
+
+@wiki.route("/comments/<int:comment_id>/edit", methods=["POST"])
+def edit_wiki(comment_id: int):
+ payload = request.json
+ insert_dict = {
+ "Id": comment_id,
+ "versionId": payload["version_id"],
+ "symbol": payload["symbol"],
+ "PubMed_ID": payload.get("pubmed_id"),
+ "SpeciesID": payload["species_id"],
+ "comment": payload["comment"],
+ # does this need to be part of the payload or can we get this from session information
+ # e.g. https://github.com/genenetwork/genenetwork2/blob/0998033d0a7ea26ed96b00a360a334bae6de8c55/gn2/wqflask/oauth2/session.py#L22-L23
+ "email": payload["email"],
+ # DB doesn't default to now
+ "createtime": datetime.datetime.now(datetime.timezone.utc).strftime(
+ "%Y-%m-%d %H:%M"
+ ),
+ "user_ip": request.environ.get("HTTP_X_REAL_IP", request.remote_addr),
+ "weburl": payload.get("web_url"),
+ "initial": payload.get("initial"),
+ "reason": payload["reason"],
+ }
+
+ if not isinstance(insert_dict["versionId"], int):
+ return jsonify(
+ error=f"Error editting wiki entry, expected versionId as int but got {insert_dict['versionId']}!"
+ ), 500
+ if not isinstance(insert_dict["SpeciesID"], int):
+ return jsonify(
+ error=f"Error editting wiki entry, expected versionId as int but got {insert_dict['SpeciesID']}!"
+ ), 500
+
+ insert_query = """
+ INSERT INTO GeneRIF (Id, versionId, symbol, PubMed_ID, SpeciesID, comment,
+ email, createtime, user_ip, weburl, initial, reason)
+ VALUES (%(Id)s, %(versionId)s, %(symbol)s, %(PubMed_ID)s, %(SpeciesID)s, %(comment)s, %(email)s, %(createtime)s, %(user_ip)s, %(weburl)s, %(initial)s, %(reason)s)
+ """
+ with db_utils.database_connection(current_app.config["SQL_URI"]) as conn:
+ cursor = conn.cursor()
+ current_app.logger.error(f"Inserting: {insert_dict}")
+ current_app.logger.error(f"wiht query: {insert_query}")
+ cursor.execute(insert_query, insert_dict)
+ return jsonify({"success": "ok"})
+ return jsonify(error="Error editting wiki entry, most likely due to DB error!"), 500