diff options
Diffstat (limited to 'gn3/api/gemma.py')
| -rw-r--r-- | gn3/api/gemma.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/gn3/api/gemma.py b/gn3/api/gemma.py index 7c76f2f..a351ab1 100644 --- a/gn3/api/gemma.py +++ b/gn3/api/gemma.py @@ -19,7 +19,7 @@ gemma = Blueprint("gemma", __name__) @gemma.route("/version") def get_version(): """Display the installed version of gemma-wrapper""" - gemma_cmd = current_app.config['APP_DEFAULTS'].get('GEMMA_WRAPPER_CMD') + gemma_cmd = current_app.config["GEMMA_WRAPPER_CMD"] return jsonify( run_cmd(f"{gemma_cmd} -v | head -n 1")) @@ -34,7 +34,7 @@ file output is returned. """ data = request.get_json() - app_defaults = current_app.config.get('APP_DEFAULTS') + app_defaults = current_app.config __hash = generate_hash_of_string( f"{data.get('genofile_name')}_" ''.join(data.get("values", ""))) @@ -52,7 +52,7 @@ file output is returned. if data.get("loco"): gemma_wrapper_kwargs["loco"] = f"--input {data.get('loco')}" k_computation_cmd = generate_gemma_computation_cmd( - gemma_cmd=app_defaults.get("GEMMA_WRAPPER_CMD") + "_haha", + gemma_cmd=app_defaults.get("GEMMA_WRAPPER_CMD"), gemma_wrapper_kwargs={"loco": f"--input {data.get('loco')}"}, gemma_kwargs=gemma_kwargs, output_file=(f"{app_defaults.get('TMPDIR')}/gn2/" |