diff options
Diffstat (limited to 'gn3/api/correlation.py')
| -rw-r--r-- | gn3/api/correlation.py | 16 |
1 files changed, 7 insertions, 9 deletions
diff --git a/gn3/api/correlation.py b/gn3/api/correlation.py index 14c029c..f2ac4d7 100644 --- a/gn3/api/correlation.py +++ b/gn3/api/correlation.py @@ -68,17 +68,15 @@ def compute_lit_corr(species=None, gene_id=None): might be needed for actual computing of the correlation results """ - conn, _cursor_object = database_connector() - target_traits_gene_ids = request.get_json() - target_trait_gene_list = list(target_traits_gene_ids.items()) + with database_connector() as conn: + target_traits_gene_ids = request.get_json() + target_trait_gene_list = list(target_traits_gene_ids.items()) - lit_corr_results = compute_all_lit_correlation( - conn=conn, trait_lists=target_trait_gene_list, - species=species, gene_id=gene_id) + lit_corr_results = compute_all_lit_correlation( + conn=conn, trait_lists=target_trait_gene_list, + species=species, gene_id=gene_id) - conn.close() - - return jsonify(lit_corr_results) + return jsonify(lit_corr_results) @correlation.route("/tissue_corr/<string:corr_method>", methods=["POST"]) |