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Diffstat (limited to 'docs')
| -rw-r--r-- | docs/correlation.md | 42 |
1 files changed, 0 insertions, 42 deletions
diff --git a/docs/correlation.md b/docs/correlation.md deleted file mode 100644 index bd1b278..0000000 --- a/docs/correlation.md +++ /dev/null @@ -1,42 +0,0 @@ -### endpoint for correlation endpoint - -- The endpoint for correlation is -```python - - /api/correlation/compute/corr_compute -``` - - -**To be noted before spinning the server for correlation computation\which can be set for example env -SQL_URI=mysql://user:password@localhost/db_webqtl and also to GENENETWORK_FILES default is HOME+"/data/genotype_files** - -(required input data *should be in json format*) -- "primary_samples": "", -- "trait_id" -- "dataset" -- "sample_vals" -- "corr_type" -- "corr_dataset" -- "corr_return_results" -- "corr_samples_group" -- "corr_sample_method" -- "min_expr" -- "location_type" -- "loc_chr" -- "min_loc_mb" -- "max_loc_mb" -- "p_range_lower" -- "p_range_upper" - -- example - -```bash -curl -X POST -H "Content-Type: application/json" \ - -d '{"primary_samles":"",trait_id:"","dataset":"","sample_vals":"","corr_type":"",corr_sample_group:"",corr_sample_method:""}' \ - localhost:5000/api/correlation/correlation_compute - - ``` - - -- output data is correlation_json - |