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-rw-r--r--README.md10
1 files changed, 5 insertions, 5 deletions
diff --git a/README.md b/README.md
index 84e5fb9..62e8aeb 100644
--- a/README.md
+++ b/README.md
@@ -9,8 +9,8 @@ Install GNU Guix - this can be done on every running Linux system.
There are at least three ways to start GeneNetwork3 with GNU Guix:
-1. Create an environment with `guix environment`
-2. Create a container with `guix environment -C`
+1. Create an environment with `guix shell`
+2. Create a container with `guix shell -C`
3. Use a profile and shell settings with `source ~/opt/genenetwork3/etc/profile`
#### Create an environment:
@@ -18,13 +18,13 @@ There are at least three ways to start GeneNetwork3 with GNU Guix:
Simply load up the environment (for development purposes):
```bash
-guix environment --load=guix.scm
+guix shell -Df guix.scm
```
Also, make sure you have the [guix-bioinformatics](https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics) channel set up.
```bash
-guix environment --expose=$HOME/genotype_files/ --load=guix.scm
+guix shell --expose=$HOME/genotype_files/ -Df guix.scm
python3
import redis
```
@@ -32,7 +32,7 @@ python3
#### Run a Guix container
```
-guix environment -C --network --expose=$HOME/genotype_files/ --load=guix.scm
+guix shell -C --network --expose=$HOME/genotype_files/ -Df guix.scm
```