diff options
| -rw-r--r-- | .guix-channel | 21 | ||||
| -rw-r--r-- | .guix/genenetwork3-package.scm | 19 | ||||
| l---------[-rw-r--r--] | guix.scm | 40 |
3 files changed, 41 insertions, 39 deletions
diff --git a/.guix-channel b/.guix-channel new file mode 100644 index 0000000..222b451 --- /dev/null +++ b/.guix-channel @@ -0,0 +1,21 @@ +;; This file lets us present this repo as a Guix channel. + +(channel + (version 0) + (directory ".guix") + (dependencies + (channel + (name guix-bioinformatics) + (url "https://gitlab.com/genenetwork/guix-bioinformatics.git")) + ;; FIXME: guix-bioinformatics depends on guix-past. So, there + ;; should be no reason to explicitly depend on guix-past. But, the + ;; channel does not build otherwise. This is probably a guix bug. + (channel + (name guix-past) + (url "https://gitlab.inria.fr/guix-hpc/guix-past") + (introduction + (channel-introduction + (version 0) + (commit "0c119db2ea86a389769f4d2b9c6f5c41c027e336") + (signer + "3CE4 6455 8A84 FDC6 9DB4 0CFB 090B 1199 3D9A EBB5")))))) diff --git a/.guix/genenetwork3-package.scm b/.guix/genenetwork3-package.scm new file mode 100644 index 0000000..9833213 --- /dev/null +++ b/.guix/genenetwork3-package.scm @@ -0,0 +1,19 @@ +(define-module (genenetwork3-package) + #:use-module ((gn packages genenetwork) + #:select (genenetwork3) #:prefix gn:) + #:use-module (guix gexp) + #:use-module (guix utils) + #:use-module (guix git-download) + #:use-module (guix packages)) + +(define-public genenetwork3 + (package + (inherit gn:genenetwork3) + (version (string-append (package-version gn:genenetwork3) "-git")) + (source (local-file ".." + "genenetwork3-checkout" + #:recursive? #t + #:select? (or (git-predicate (dirname (current-source-directory))) + (const #t)))))) + +genenetwork3 @@ -1,39 +1 @@ -;;; guix.scm --- genenetwork3 rest Api guix bootstrapping file. -;;; -;;; Copyright © 2021 Bonface Munyoki Kilyungi <me@bonfacemunyoki.com> -;;; -;;; This file is part of genenetwork3. -;;; -;;; genenetwork3 is free software: you can redistribute it and/or -;;; modify it under the terms of the GNU General Public License as -;;; published by the Free Software Foundation; either version 3 of the -;;; License, or (at your option) any later version. -;;; -;;; sheepdog is distributed in the hope that it will be useful, but -;;; WITHOUT ANY WARRANTY; without even the implied warranty of -;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU -;;; General Public License for more details. -;;; -;;; You should have received a copy of the GNU General Public License -;;; along with genenetwork3. If not, see https://www.gnu.org/licenses/. - -;; Make sure you have the -;; https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics channel -;; set up. -;; -;; To get a development container (e.g., run in emacs shell). -;; -;; guix shell -C -Df guix.scm - -(use-modules (gn packages genenetwork) - (guix gexp) - (guix git-download) - (guix packages)) - -(define %source-dir (dirname (current-filename))) - -(package - (inherit genenetwork3) - (source (local-file %source-dir "genenetwork3-checkout" - #:recursive? #t - #:select? (git-predicate %source-dir)))) +.guix/genenetwork3-package.scm
\ No newline at end of file |