diff options
| -rw-r--r-- | gn3/computations/rqtl2.py | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py index 17e77d6..c64ca08 100644 --- a/gn3/computations/rqtl2.py +++ b/gn3/computations/rqtl2.py @@ -21,7 +21,8 @@ def generate_rqtl2_files(data, workspace_dir): for file_name, data_key in file_to_name_map.items(): if data_key in data: file_path = write_to_csv(workspace_dir, f"{file_name}.csv", data[data_key]) - parsed_files[file_name] = file_path + if file_path: + parsed_files[file_name] = file_path return {**data, **parsed_files} @@ -31,7 +32,7 @@ def write_to_csv(work_dir, file_name, data:list[dict], if headers is not provided use the keys for first boject. """ if not data: - return + return "" if headers is None: headers = data[0].keys() file_path = os.path.join(work_dir, file_name) |