diff options
| -rw-r--r-- | gn3/computations/slink.py | 12 | ||||
| -rw-r--r-- | tests/unit/computations/test_slink.py | 6 |
2 files changed, 18 insertions, 0 deletions
diff --git a/gn3/computations/slink.py b/gn3/computations/slink.py index c29ddb0..103a853 100644 --- a/gn3/computations/slink.py +++ b/gn3/computations/slink.py @@ -6,6 +6,7 @@ FUNCTIONS: slink: TODO: Describe what the function does... """ +import logging from functools import partial class LengthError(BaseException): @@ -116,3 +117,14 @@ def nearest(lists, i, j): return min(ns) else: raise ValueError("member values (i or j) should be lists/tuples of integers or integers") + +def slink(lists): + """ + """ + try: + nearest(lists, 1, 2) + except Exception as e: + # TODO: Look into making the logging log output to the system's + # configured logger(s) + logging.warning("Exception: {}, {}".format(type(e), e)) + return [] diff --git a/tests/unit/computations/test_slink.py b/tests/unit/computations/test_slink.py index dd42d5d..bdfaf6d 100644 --- a/tests/unit/computations/test_slink.py +++ b/tests/unit/computations/test_slink.py @@ -2,6 +2,7 @@ import unittest from unittest import TestCase +from gn3.computations.slink import slink from gn3.computations.slink import nearest from gn3.computations.slink import LengthError from gn3.computations.slink import MirrorError @@ -200,3 +201,8 @@ class TestSlink(TestCase): expected_distance=ed): self.assertEqual(nearest(md, ml, mc), ed) self.assertEqual(nearest(md, mc, ml), ed) + + def test_slink_wrong_data_returns_empty_list(self): + for data in [1, "test", [], 2.945, nearest]: + with self.subTest(data=data): + self.assertEqual(slink(data), []) |