diff options
| -rw-r--r-- | gn3/api/wgcna.py | 12 |
1 files changed, 10 insertions, 2 deletions
diff --git a/gn3/api/wgcna.py b/gn3/api/wgcna.py index a3bacdd..5d49493 100644 --- a/gn3/api/wgcna.py +++ b/gn3/api/wgcna.py @@ -1,13 +1,21 @@ """endpoint to run wgcna analysis""" from flask import Blueprint from flask import request +from flask import current_app + +from gn3.computations.wgcna import call_wgcna_script wgcna = Blueprint("wgcna", __name__) @wgcna.route("/run_wgcna", methods=["POST"]) def run_wgcna(): + """run wgcna:output should be a json with a the data""" + + wgcna_data = request.json + + wgcna_script = current_app.config["WGCNA_RSCRIPT"] - _wgcna_data = request.json + results = call_wgcna_script(wgcna_script, wgcna_data) - return "success", 200 + return results, 200 |