diff options
| -rw-r--r-- | gn3/csvcmp.py | 8 |
1 files changed, 2 insertions, 6 deletions
diff --git a/gn3/csvcmp.py b/gn3/csvcmp.py index 87a1610..82d491e 100644 --- a/gn3/csvcmp.py +++ b/gn3/csvcmp.py @@ -73,13 +73,9 @@ def csv_diff(base_csv, delta_csv, tmp_dir="/tmp") -> dict: longest_header = max(base_csv_header, delta_csv_header, key=lambda x: len(x)) if base_csv_header != delta_csv_header: if longest_header != base_csv_header: - base_csv = base_csv.replace( - "Strain Name,Value,SE,Count", longest_header, 1 - ) + base_csv = "\n".join([longest_header] + base_csv_list[1:]) else: - delta_csv = delta_csv.replace( - "Strain Name,Value,SE,Count", longest_header, 1 - ) + delta_csv = "\n".join([longest_header] + delta_csv_list[1:]) file_name1 = os.path.join(tmp_dir, str(uuid.uuid4())) file_name2 = os.path.join(tmp_dir, str(uuid.uuid4())) |