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author | BonfaceKilz | 2021-03-04 22:20:55 +0300 |
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committer | BonfaceKilz | 2021-03-08 21:09:58 +0300 |
commit | db1eaaf359749814859b969d1fb4fb3341004705 (patch) | |
tree | ccef744cfdff067b4e2980cbaea6d487bf4c40f5 /tests | |
parent | 47684b060649695f32a7fe465f018b8ffb53cf37 (diff) | |
download | genenetwork3-db1eaaf359749814859b969d1fb4fb3341004705.tar.gz |
bug: Put a space between gemma-wrapper args
Diffstat (limited to 'tests')
-rw-r--r-- | tests/unit/test_commands.py | 17 |
1 files changed, 17 insertions, 0 deletions
diff --git a/tests/unit/test_commands.py b/tests/unit/test_commands.py index 846d20c..c51118d 100644 --- a/tests/unit/test_commands.py +++ b/tests/unit/test_commands.py @@ -36,6 +36,23 @@ class TestCommands(unittest.TestCase): "-p /tmp/gf13Ad0tRX/phenofile.txt" " -gk")) + def test_compose_gemma_cmd_extra_args(self): + """Test that the gemma cmd is composed correctly""" + self.assertEqual( + compose_gemma_cmd(gemma_wrapper_cmd="gemma-wrapper", + gemma_wrapper_kwargs={ + "loco": "1,2,3,4" + }, + gemma_kwargs={ + "g": "/tmp/genofile.txt", + "p": "/tmp/gf13Ad0tRX/phenofile.txt" + }, + gemma_args=["-gk"]), + ("gemma-wrapper --json --loco 1,2,3,4 -- " + "-g /tmp/genofile.txt " + "-p /tmp/gf13Ad0tRX/phenofile.txt" + " -gk")) + def test_queue_cmd_exception_raised_when_redis_is_down(self): """Test that the correct error is raised when Redis is unavailable""" self.assertRaises(RedisConnectionError, |