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| author | zsloan | 2021-06-18 21:27:38 +0000 |
|---|---|---|
| committer | zsloan | 2021-06-18 22:08:04 +0000 |
| commit | 12089cb2eae2201d3b348d21dd0e93a61e16e7c7 (patch) | |
| tree | 5ef8ba7567d33d9ba1032bb22f46fecbdbd2d43a /tests | |
| parent | d42b85ae5fcea1b71a7165fd6e64745a228c48f9 (diff) | |
| download | genenetwork3-12089cb2eae2201d3b348d21dd0e93a61e16e7c7.tar.gz | |
Change test_compose_rqtl_command in test_commands.py to have different arguments to hopefully avoid github's pylint 'duplicate code' complaint
Changed some parameters in test_compose_rqtl_cmd to avoid pylint complaining about duplicate code
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/unit/test_commands.py | 25 |
1 files changed, 12 insertions, 13 deletions
diff --git a/tests/unit/test_commands.py b/tests/unit/test_commands.py index a3d0273..aaefb23 100644 --- a/tests/unit/test_commands.py +++ b/tests/unit/test_commands.py @@ -59,24 +59,23 @@ class TestCommands(unittest.TestCase): self.assertEqual( compose_rqtl_cmd(rqtl_wrapper_cmd="rqtl-wrapper", rqtl_wrapper_kwargs={ - "g": "genofile", - "p": "phenofile", - "model": "normal", - "method": "hk", - "nperm": 1000, + "g": "the_genofile", + "p": "the_phenofile", + "model": "np", + "method": "ehk", + "nperm": 2000, "scale": "Mb", - "control": "rs123456" + "control": "rs234567" }, rqtl_wrapper_bool_kwargs=[ - "addcovar", - "interval" + "addcovar" ]), ("rqtl-wrapper " - "--g genofile --p phenofile " - "--model normal --method hk " - "--nperm 1000 --scale Mb " - "--control rs123456 " - "--addcovar --interval") + "--g the_genofile --p the_phenofile " + "--model np --method ehk " + "--nperm 2000 --scale Mb " + "--control rs234567 " + "--addcovar") ) def test_queue_cmd_exception_raised_when_redis_is_down(self): |