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| author | Alexander Kabui | 2021-08-20 09:04:12 +0300 |
|---|---|---|
| committer | GitHub | 2021-08-20 09:04:12 +0300 |
| commit | c9ee473ff7797f6bbd7507eb55c772a3a646acee (patch) | |
| tree | d14302938081ce61637ae84cda2077aaf0db9733 /tests | |
| parent | f8be3a85567cc17d50a01382eb10cb3b05436214 (diff) | |
| download | genenetwork3-c9ee473ff7797f6bbd7507eb55c772a3a646acee.tar.gz | |
Minor correlation fixes (#36)
* fix key error for (*tissue_cor) tissue correlation
* update tests for tissue correlation
* rename speed_compute to fast_compute
* pep8 formatting
Diffstat (limited to 'tests')
| -rw-r--r-- | tests/unit/computations/test_correlation.py | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py index f2d65bd..fc52ec1 100644 --- a/tests/unit/computations/test_correlation.py +++ b/tests/unit/computations/test_correlation.py @@ -406,10 +406,10 @@ class TestCorrelation(TestCase): target_tissue_data = {"trait_symbol_dict": target_trait_symbol, "symbol_tissue_vals_dict": target_symbol_tissue_vals} - mock_tissue_corr.side_effect = [{"tissue_corr": -0.5, "tissue_p_val": 0.9, - "tissue_number": 3}, - {"tissue_corr": 1.11, "tissue_p_val": 0.2, - "tissue_number": 3}] + mock_tissue_corr.side_effect = [{"1418702_a_at": {"tissue_corr": -0.5, "tissue_p_val": 0.9, + "tissue_number": 3}}, + {"1412_at": {"tissue_corr": 1.11, "tissue_p_val": 0.2, + "tissue_number": 3}}] expected_results = [{"1412_at": {"tissue_corr": 1.11, "tissue_p_val": 0.2, "tissue_number": 3}}, |