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authorAlexander Kabui2021-06-20 09:04:55 +0300
committerAlexander Kabui2021-06-20 09:04:55 +0300
commit864f231bbdbe2c3b3c96b0158a15811ac7790c3f (patch)
treed0d0eee217c984bd72ecfacc0b131848fcb5b89d /tests
parentb566a8950864a373f95ae2914b862e9846297b2d (diff)
downloadgenenetwork3-864f231bbdbe2c3b3c96b0158a15811ac7790c3f.tar.gz
make requested changes to biweight
Diffstat (limited to 'tests')
-rw-r--r--tests/unit/computations/test_biweight.py16
-rw-r--r--tests/unit/computations/test_correlation.py2
2 files changed, 9 insertions, 9 deletions
diff --git a/tests/unit/computations/test_biweight.py b/tests/unit/computations/test_biweight.py
index 3045f78..ad404f1 100644
--- a/tests/unit/computations/test_biweight.py
+++ b/tests/unit/computations/test_biweight.py
@@ -2,20 +2,20 @@
 from unittest import TestCase
 from unittest import mock
 
-from gn3.computations.biweight import call_biweight_script
+from gn3.computations.biweight import calculate_biweight_corr
 
 
 class TestBiweight(TestCase):
     """test class for biweight"""
 
     @mock.patch("gn3.computations.biweight.subprocess.check_output")
-    def test_call_biweight_script(self, mock_check_output):
-        """test for call_biweight_script func"""
+    def test_calculate_biweight_corr(self, mock_check_output):
+        """test for calculate_biweight_corr func"""
         mock_check_output.return_value = "0.1 0.5"
-        results = call_biweight_script(command="Rscript",
-                                       path_to_script="./r_script.R",
-                                       trait_vals=[
-                                           1.2, 1.1, 1.9],
-                                       target_vals=[1.9, 0.4, 1.1])
+        results = calculate_biweight_corr(command="Rscript",
+                                          path_to_script="./r_script.R",
+                                          trait_vals=[
+                                              1.2, 1.1, 1.9],
+                                          target_vals=[1.9, 0.4, 1.1])
 
         self.assertEqual(results, (0.1, 0.5))
diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py
index 606f96d..b1bc6ef 100644
--- a/tests/unit/computations/test_correlation.py
+++ b/tests/unit/computations/test_correlation.py
@@ -98,7 +98,7 @@ class TestCorrelation(TestCase):
 
         self.assertEqual(results, expected_results)
 
-    @mock.patch("gn3.computations.correlations.call_biweight_script")
+    @mock.patch("gn3.computations.correlations.calculate_biweight_corr")
     def test_bicor(self, mock_biweight):
         """Test for doing biweight mid correlation """
         mock_biweight.return_value = (1.0, 0.0)