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author | BonfaceKilz | 2022-02-24 17:13:17 +0300 |
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committer | BonfaceKilz | 2022-03-12 15:33:09 +0300 |
commit | e225054a167086b97923a8449fd0af013ce26933 (patch) | |
tree | 7e72266aa739c2de8b55b70ef9c286522f342276 /tests/unit | |
parent | 613987ef99009574bfd403973210de4d90da7c73 (diff) | |
download | genenetwork3-e225054a167086b97923a8449fd0af013ce26933.tar.gz |
Create new method for filling csv with a default value
* gn3/csvcmp.py (fill_csv): Given a csv text with uneven or incomplete fields
whole length are less than width, fill them with a value which defaults to
"x".
* tests/unit/test_csvcmp.py (test_fill_csv): Test cases for the above.
Diffstat (limited to 'tests/unit')
-rw-r--r-- | tests/unit/test_csvcmp.py | 17 |
1 files changed, 17 insertions, 0 deletions
diff --git a/tests/unit/test_csvcmp.py b/tests/unit/test_csvcmp.py index f73865d..716adb5 100644 --- a/tests/unit/test_csvcmp.py +++ b/tests/unit/test_csvcmp.py @@ -1,10 +1,27 @@ from gn3.csvcmp import csv_diff +from gn3.csvcmp import fill_csv from gn3.csvcmp import remove_insignificant_edits import pytest @pytest.mark.unit_test +def test_fill_csv(): + test_input = """ +Strain Name,Value,SE,Count +BXD1,18,x,0 +BXD12,16,x,x +BXD14,15,x,x +BXD15,14,x,x +""" + expected_output = """Strain Name,Value,SE,Count,Sex +BXD1,18,x,0,x +BXD12,16,x,x,x +BXD14,15,x,x,x +BXD15,14,x,x,x""" + assert(fill_csv(test_input, width=5, value="x")) + +@pytest.mark.unit_test def test_remove_insignificant_data(): diff_data = { 'Additions': [], |