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authorAlexander Kabui2021-05-12 19:57:01 +0300
committerAlexander Kabui2021-05-12 19:57:01 +0300
commit0f2b3be58b8265858d17581b85cab5ac4f13e097 (patch)
treefee3e8883e959c8608bf811efc4aafdfb20733be /tests/unit
parent9215c0d412bd885db3c3bbcb5635c22ac932b6f4 (diff)
downloadgenenetwork3-0f2b3be58b8265858d17581b85cab5ac4f13e097.tar.gz
delete unused functions
Diffstat (limited to 'tests/unit')
-rw-r--r--tests/unit/computations/test_correlation.py13
1 files changed, 0 insertions, 13 deletions
diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py
index 8bf5b37..52c1f85 100644
--- a/tests/unit/computations/test_correlation.py
+++ b/tests/unit/computations/test_correlation.py
@@ -10,7 +10,6 @@ from gn3.computations.correlations import do_bicor
from gn3.computations.correlations import compute_sample_r_correlation
from gn3.computations.correlations import compute_all_sample_correlation
from gn3.computations.correlations import filter_shared_sample_keys
-from gn3.computations.correlations import tissue_lit_corr_for_probe_type
from gn3.computations.correlations import tissue_correlation_for_trait
from gn3.computations.correlations import lit_correlation_for_trait
from gn3.computations.correlations import fetch_lit_correlation_data
@@ -214,18 +213,6 @@ class TestCorrelation(TestCase):
filter_shared_samples.assert_called_once_with(
this_trait_data.get("trait_sample_data"), traits_dataset[0].get("trait_sample_data"))
- @unittest.skip("not implemented")
- def test_tissue_lit_corr_for_probe_type(self):
- """Tests for doing tissue and lit correlation for trait list\
- if both the dataset and target dataset are probeset runs\
- on after initial correlation has been done
- """
-
- results = tissue_lit_corr_for_probe_type(
- corr_type="tissue", top_corr_results={})
-
- self.assertEqual(results, (None, None))
-
@mock.patch("gn3.computations.correlations.compute_corr_coeff_p_value")
def test_tissue_correlation_for_trait(self, mock_compute_corr_coeff):
"""Test given a primary tissue values for a trait and and a list of\