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authorMuriithi Frederick Muriuki2021-09-08 06:52:01 +0300
committerMuriithi Frederick Muriuki2021-09-08 07:02:20 +0300
commit31ca02d1f095c2cc667e5b7d49131d702982f321 (patch)
tree734f3a379fac6f8648a9228fb6f89f30ea2952b9 /tests/unit/test_data
parentd4943f1d01d89a3928c905f80914a23144126c8e (diff)
downloadgenenetwork3-31ca02d1f095c2cc667e5b7d49131d702982f321.tar.gz
Fix the traits order computations for clustering
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi

* gn3/computations/heatmap.py: Fix ordering function
* tests/unit/computations/test_heatmap.py: update test

  The order of the traits is important for the clustering algorithm, since the
  clustering seems to use the distance of one trait from another to determine
  how to order them.

  This commit also gets rid of the xoffset argument that is not important to
  the ordering, and was used in the older GN1 to determine how to draw the
  clustering lines.
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