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authorBonfaceKilz2022-03-01 16:49:54 +0300
committerBonfaceKilz2022-03-12 15:33:09 +0300
commitba006bdd5ae2053575e11539186d5c5041f070c1 (patch)
treef956eff9d5db47d206af9cb4c3115fe83e1aece5 /tests/unit/test_csvcmp.py
parent2b3494a8596f4978a64e03a8e1a1a033ac06b6b9 (diff)
downloadgenenetwork3-ba006bdd5ae2053575e11539186d5c5041f070c1.tar.gz
Fill in empty values in csv text with: "x"
* gn3/csvcmp.py (fill_csv): Update this function to allow empty lists to be filled with the default value(set in the args). * tests/unit/test_csvcmp.py (test_fill_csv): Update test to capture above.
Diffstat (limited to 'tests/unit/test_csvcmp.py')
-rw-r--r--tests/unit/test_csvcmp.py10
1 files changed, 5 insertions, 5 deletions
diff --git a/tests/unit/test_csvcmp.py b/tests/unit/test_csvcmp.py
index fd7aa28..3c9ba33 100644
--- a/tests/unit/test_csvcmp.py
+++ b/tests/unit/test_csvcmp.py
@@ -9,10 +9,10 @@ import pytest
@pytest.mark.unit_test
def test_fill_csv():
test_input = """
-Strain Name,Value,SE,Count
-BXD1,18,x,0
-BXD12,16,x,x
-BXD14,15,x,x
+Strain Name,Value,SE,Count,Sex
+BXD1,18,x,0,
+BXD12,16,x,x,
+BXD14,15,x,x,
BXD15,14,x,x
"""
expected_output = """Strain Name,Value,SE,Count,Sex
@@ -20,7 +20,7 @@ BXD1,18,x,0,x
BXD12,16,x,x,x
BXD14,15,x,x,x
BXD15,14,x,x,x"""
- assert(fill_csv(test_input, width=5, value="x"))
+ assert(fill_csv(test_input, width=5, value="x") == expected_output)
@pytest.mark.unit_test
def test_remove_insignificant_data():