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| author | Alexander Kabui | 2021-04-18 23:52:04 +0300 |
|---|---|---|
| committer | Alexander Kabui | 2021-04-18 23:52:04 +0300 |
| commit | d266ca9d59093c253ce7b56f9a14119869eb0003 (patch) | |
| tree | af3fde7e4ad9ec7b34c8ec6811940e97e8d60d19 /tests/unit/computations | |
| parent | ba1ea53443b8085700df2941e68421bcc8206c8b (diff) | |
| download | genenetwork3-d266ca9d59093c253ce7b56f9a14119869eb0003.tar.gz | |
refactor:return trait_name in corr_results
Diffstat (limited to 'tests/unit/computations')
| -rw-r--r-- | tests/unit/computations/test_correlation.py | 15 |
1 files changed, 9 insertions, 6 deletions
diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py index 9f3feab..8bb5cd1 100644 --- a/tests/unit/computations/test_correlation.py +++ b/tests/unit/computations/test_correlation.py @@ -120,21 +120,24 @@ class TestCorrelation(TestCase): [3.4, 6.2, 4, 1.1, 8, 1.1], 6) compute_corr.side_effect = [(0.7, 0.3), (-1.0, 0.9), (1, 0.21)] - pearson_results = compute_sample_r_correlation(corr_method="pearson", + pearson_results = compute_sample_r_correlation(trait_name="1412_at", + corr_method="pearson", trait_vals=primary_values, target_samples_vals=target_values) - spearman_results = compute_sample_r_correlation(corr_method="spearman", + spearman_results = compute_sample_r_correlation(trait_name="1412_at", + corr_method="spearman", trait_vals=primary_values, target_samples_vals=target_values) - bicor_results = compute_sample_r_correlation(corr_method="bicor", + bicor_results = compute_sample_r_correlation(trait_name="1412_at", + corr_method="bicor", trait_vals=primary_values, target_samples_vals=target_values) - self.assertEqual(bicor_results, (1, 0.21, 6)) - self.assertEqual(pearson_results, (0.7, 0.3, 6)) - self.assertEqual(spearman_results, (-1.0, 0.9, 6)) + self.assertEqual(bicor_results, ("1412_at", 1, 0.21, 6)) + self.assertEqual(pearson_results, ("1412_at", 0.7, 0.3, 6)) + self.assertEqual(spearman_results, ("1412_at", -1.0, 0.9, 6)) self.assertIsInstance( pearson_results, tuple, "message") |