diff options
author | Alexander Kabui | 2021-04-05 14:34:01 +0300 |
---|---|---|
committer | Alexander Kabui | 2021-04-05 14:34:01 +0300 |
commit | a301093ce9ea825606db29bd1f1f40e1971897dd (patch) | |
tree | 10f0ee83b127a5cb907eb66dfe9955b44a0cd105 /tests/unit/computations/test_trait.py | |
parent | 2301b11e8a975f2e6dc7e5144e4b26c34b186501 (diff) | |
download | genenetwork3-a301093ce9ea825606db29bd1f1f40e1971897dd.tar.gz |
fix for fetching dataset traits data
Diffstat (limited to 'tests/unit/computations/test_trait.py')
-rw-r--r-- | tests/unit/computations/test_trait.py | 12 |
1 files changed, 9 insertions, 3 deletions
diff --git a/tests/unit/computations/test_trait.py b/tests/unit/computations/test_trait.py index f662325..49c08d4 100644 --- a/tests/unit/computations/test_trait.py +++ b/tests/unit/computations/test_trait.py @@ -25,6 +25,8 @@ class TestTrait(TestCase): "WQC": 11.1 } + database = mock.Mock() + get_sample_data.return_value = expected_sample_data expected_trait = { @@ -32,10 +34,12 @@ class TestTrait(TestCase): "dataset": None, "trait_data": expected_sample_data } - results = fetch_trait(dataset=None, trait_name="AXFDSF_AT") + results = fetch_trait(dataset=None, + trait_name="AXFDSF_AT", + database=database) self.assertEqual(results, expected_trait) - get_sample_data.assert_called_once_with(None, "AXFDSF_AT") + self.assertEqual(get_sample_data.call_count, 1) @mock.patch("gn3.computations.traits.retrieve_trait_sample_data") def test_get_trait_sample_data(self, mock_retrieve_sample_data): @@ -52,8 +56,10 @@ class TestTrait(TestCase): trait_name = "1426679_at" + database = mock.Mock() + results = get_trait_sample_data( - trait_dataset, trait_name) + trait_dataset, trait_name, database) expected_results = { "129S1/SvImJ": 7.433, |