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| author | zsloan | 2021-10-12 20:56:31 +0000 |
|---|---|---|
| committer | zsloan | 2021-10-12 20:56:31 +0000 |
| commit | 6e211182354fb4d6941e3a44ec1ec9d378b0e4ef (patch) | |
| tree | 60d9aaf382eefbb47cdbab9c74d98481cf0983de /tests/unit/computations/test_parsers.py | |
| parent | b815236123ff8e144bd84f349357a1852df95651 (diff) | |
| parent | 77c274b79c3ec01de60e90db3299763cb58f715b (diff) | |
| download | genenetwork3-6e211182354fb4d6941e3a44ec1ec9d378b0e4ef.tar.gz | |
Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into bug/fix_rqtl_covariates
Diffstat (limited to 'tests/unit/computations/test_parsers.py')
| -rw-r--r-- | tests/unit/computations/test_parsers.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/tests/unit/computations/test_parsers.py b/tests/unit/computations/test_parsers.py index 19c3067..b51b0bf 100644 --- a/tests/unit/computations/test_parsers.py +++ b/tests/unit/computations/test_parsers.py @@ -15,7 +15,7 @@ class TestParsers(unittest.TestCase): def test_parse_genofile_with_existing_file(self): """Test that a genotype file is parsed correctly""" - strains = ["bxd1", "bxd2"] + samples = ["bxd1", "bxd2"] genotypes = [ {"chr": "1", "locus": "rs31443144", "cm": "1.50", "mb": "3.010274", @@ -51,4 +51,4 @@ class TestParsers(unittest.TestCase): "../test_data/genotype.txt" )) self.assertEqual(parse_genofile( - test_genotype_file), (strains, genotypes)) + test_genotype_file), (samples, genotypes)) |