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author | Frederick Muriuki Muriithi | 2021-12-06 14:04:59 +0300 |
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committer | Frederick Muriuki Muriithi | 2021-12-06 14:04:59 +0300 |
commit | 66406115f41594ba40e3fbbc6f69aace2d11800f (patch) | |
tree | 0f3de09b74a3f47918dd4a192665c8a06c508144 /tests/unit/computations/test_biweight.py | |
parent | 77099cac68e8f4792bf54d8e1f7ce6f315bedfa7 (diff) | |
parent | 5d2248f1dabbc7dd04f48aafcc9f327817a9c92c (diff) | |
download | genenetwork3-66406115f41594ba40e3fbbc6f69aace2d11800f.tar.gz |
Merge branch 'partial-correlations'
Diffstat (limited to 'tests/unit/computations/test_biweight.py')
-rw-r--r-- | tests/unit/computations/test_biweight.py | 21 |
1 files changed, 0 insertions, 21 deletions
diff --git a/tests/unit/computations/test_biweight.py b/tests/unit/computations/test_biweight.py deleted file mode 100644 index ad404f1..0000000 --- a/tests/unit/computations/test_biweight.py +++ /dev/null @@ -1,21 +0,0 @@ -"""test for biweight script""" -from unittest import TestCase -from unittest import mock - -from gn3.computations.biweight import calculate_biweight_corr - - -class TestBiweight(TestCase): - """test class for biweight""" - - @mock.patch("gn3.computations.biweight.subprocess.check_output") - def test_calculate_biweight_corr(self, mock_check_output): - """test for calculate_biweight_corr func""" - mock_check_output.return_value = "0.1 0.5" - results = calculate_biweight_corr(command="Rscript", - path_to_script="./r_script.R", - trait_vals=[ - 1.2, 1.1, 1.9], - target_vals=[1.9, 0.4, 1.1]) - - self.assertEqual(results, (0.1, 0.5)) |