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authorFrederick Muriuki Muriithi2021-12-06 14:04:59 +0300
committerFrederick Muriuki Muriithi2021-12-06 14:04:59 +0300
commit66406115f41594ba40e3fbbc6f69aace2d11800f (patch)
tree0f3de09b74a3f47918dd4a192665c8a06c508144 /tests/unit/computations/test_biweight.py
parent77099cac68e8f4792bf54d8e1f7ce6f315bedfa7 (diff)
parent5d2248f1dabbc7dd04f48aafcc9f327817a9c92c (diff)
downloadgenenetwork3-66406115f41594ba40e3fbbc6f69aace2d11800f.tar.gz
Merge branch 'partial-correlations'
Diffstat (limited to 'tests/unit/computations/test_biweight.py')
-rw-r--r--tests/unit/computations/test_biweight.py21
1 files changed, 0 insertions, 21 deletions
diff --git a/tests/unit/computations/test_biweight.py b/tests/unit/computations/test_biweight.py
deleted file mode 100644
index ad404f1..0000000
--- a/tests/unit/computations/test_biweight.py
+++ /dev/null
@@ -1,21 +0,0 @@
-"""test for biweight script"""
-from unittest import TestCase
-from unittest import mock
-
-from gn3.computations.biweight import calculate_biweight_corr
-
-
-class TestBiweight(TestCase):
- """test class for biweight"""
-
- @mock.patch("gn3.computations.biweight.subprocess.check_output")
- def test_calculate_biweight_corr(self, mock_check_output):
- """test for calculate_biweight_corr func"""
- mock_check_output.return_value = "0.1 0.5"
- results = calculate_biweight_corr(command="Rscript",
- path_to_script="./r_script.R",
- trait_vals=[
- 1.2, 1.1, 1.9],
- target_vals=[1.9, 0.4, 1.1])
-
- self.assertEqual(results, (0.1, 0.5))