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authorFrederick Muriuki Muriithi2021-11-01 08:18:48 +0300
committerFrederick Muriuki Muriithi2021-11-01 08:18:48 +0300
commit37cf87e94a44ba2ab26a8e458e0c5a90fe5ecc7a (patch)
tree74ab24ef436772c9abac569c816539c20fa7b5e7 /tests/test_data
parentd4919b2b59facb79ccad155e1d2826a97119ec28 (diff)
downloadgenenetwork3-37cf87e94a44ba2ab26a8e458e0c5a90fe5ecc7a.tar.gz
Retrieve indices of the selected samples
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi

* gn3/computations/partial_correlations.py: New
  function (good_dataset_samples_indexes).
* tests/unit/computations/test_partial_correlations.py: Tests for new
  function (good_dataset_samples_indexes)

  Get the indices of the selected samples. This is a partial migration of the
  `web.webqtl.correlation.PartialCorrDBPage.getPartialCorrelationsFast`
  function in GN1.
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