delete dataset and trait files

2 files changed, 0 insertions, 113 deletions

diff --git a/tests/integration/test_datasets.py b/tests/integration/test_datasets.py
deleted file mode 100644
index f97d970..0000000
--- a/tests/integration/test_datasets.py
+++ /dev/null
@@ -1,41 +0,0 @@
-"""This module contains integration tests for datasets"""
-from unittest import TestCase
-from unittest import mock
-
-from collections import namedtuple
-from gn3.app import create_app
-
-
-class DatasetIntegrationTests(TestCase):
-    """class contains integration tests for datasets"""
-
-    def setUp(self):
-        self.app = create_app().test_client()
-
-    @mock.patch("gn3.api.datasets.create_dataset")
-    def test_create_dataset(self, mock_dataset):
-        """Test for creating dataset object"""
-        mock_dataset_creator = namedtuple(
-            'ProbeSet', ["dataset_name", "dataset_type"])
-        new_dataset = mock_dataset_creator("HC_M2_0606_P", "ProbeSet")
-        mock_dataset.return_value = new_dataset
-        response = self.app.get(
-            "/api/dataset/create/HC_M2_0606_P/", follow_redirects=True)
-        mock_dataset.assert_called_once_with(
-            dataset_type=None, dataset_name="HC_M2_0606_P")
-        results = response.get_json()["dataset"]
-        self.assertEqual(results[1], "ProbeSet")
-        self.assertEqual(response.status_code, 200)
-
-    @mock.patch("gn3.api.datasets.get_traits_data")
-    @mock.patch("gn3.api.datasets.database_connector")
-    def test_fetch_traits_data(self, mock_db, mock_get_trait_data):
-        """Test api/dataset/fetch_traits_data/d_name/d_type"""
-
-        mock_get_trait_data.return_value = {}
-        mock_db.return_value = (mock.Mock(), mock.Mock())
-        response = self.app.get(
-            "/api/dataset/fetch_traits_data/Aging-Brain-UCIPublish/Publish", follow_redirects=True)
-
-        self.assertEqual(response.status_code, 200)
-        self.assertEqual(response.get_json(), {"results": {}})
diff --git a/tests/integration/test_traits.py b/tests/integration/test_traits.py
deleted file mode 100644
index 410ba22..0000000
--- a/tests/integration/test_traits.py
+++ /dev/null
@@ -1,72 +0,0 @@
-"""module contains integration tests for trait endpoints"""
-from unittest import TestCase
-from unittest import mock
-
-from gn3.app import create_app
-
-
-class TraitIntegrationTest(TestCase):
-    """class contains integration tests for\
-    traits"""
-
-    def setUp(self):
-        self.app = create_app().test_client()
-
-    @mock.patch("gn3.api.traits.fetch_trait")
-    @mock.patch("gn3.api.traits.database_connector")
-    def test_create_trait(self, mock_database, mock_fetch_trait):
-        """test the endpoint for creating traits\
-        endpoint requires trait name and dataset name"""
-        mock_database.return_value = (mock.Mock(), mock.Mock())
-        trait_results = {
-            "dataset": None,
-            "trait_name": "1449593_at",
-            "trait_data": {
-                "BXD11": 8.464,
-                "BXD12": 8.414,
-                "BXD13": 8.753,
-                "BXD15": 8.5,
-                "BXD16": 8.832
-            }
-
-        }
-        mock_fetch_trait.return_value = trait_results
-
-        results = self.app.get(
-            "/api/trait/1449593_at/HC_M2_0606_P", follow_redirects=True)
-
-        trait_data = results.get_json()
-
-        self.assertEqual(mock_database.call_count, 1)
-        self.assertEqual(results.status_code, 200)
-        self.assertEqual(trait_data, trait_results)
-
-    @mock.patch("gn3.api.traits.get_trait_info_data")
-    def test_retrieve_trait_info(self, mock_get_trait_info):
-        """integration test for endpoints for retrieving\
-        trait info expects the dataset of trait to have been
-        created"""
-
-        trait_post_data = {
-            "trait": {"trait_name": ""},
-            "trait_dataset": {"dataset_name": ""}
-        }
-
-        expected_api_results = {
-            "description": "trait description",
-            "chr": "",
-            "locus": "",
-            "mb": "",
-            "abbreviation": "trait_abbreviation",
-            "trait_display_name": "trait_name"
-
-        }
-        mock_get_trait_info.return_value = expected_api_results
-
-        trait_info = self.app.post(
-            "/api/trait/trait_info/144_at", json=trait_post_data, follow_redirects=True)
-
-        trait_info_results = trait_info.get_json()
-
-        self.assertEqual(trait_info.status_code, 200)
-        self.assertEqual(trait_info_results, expected_api_results)