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authorBonfaceKilz2021-03-10 14:59:25 +0300
committerBonfaceKilz2021-03-10 14:59:25 +0300
commit8478bc9ee572224fe3b76696de85d1c9a7a89399 (patch)
treeb12542a1404b58a5cf05a9b63c4bbdb3990b394c /tests/integration/test_gemma.py
parent9170e293e896d1d283d3b19d79d673c9a92724d2 (diff)
downloadgenenetwork3-8478bc9ee572224fe3b76696de85d1c9a7a89399.tar.gz
Fix k-compute command when "loco" is true
Diffstat (limited to 'tests/integration/test_gemma.py')
-rw-r--r--tests/integration/test_gemma.py6
1 files changed, 3 insertions, 3 deletions
diff --git a/tests/integration/test_gemma.py b/tests/integration/test_gemma.py
index 7a7f520..73c7baa 100644
--- a/tests/integration/test_gemma.py
+++ b/tests/integration/test_gemma.py
@@ -110,7 +110,7 @@ class GemmaAPITest(unittest.TestCase):
email=None,
job_queue='GN3::job-queue',
cmd=("gemma-wrapper --json --loco "
- "--input 1,2,3,4,5,6 -- "
+ "1,2,3,4,5,6 -- "
"-g /tmp/test-data/genofile.txt "
"-p /tmp/test-data/phenofile.txt "
"-a /tmp/test-data/snpfile.txt "
@@ -435,7 +435,7 @@ class GemmaAPITest(unittest.TestCase):
conn=_redis_conn,
email=None,
job_queue='GN3::job-queue',
- cmd=("gemma-wrapper --json --loco --input 1,2,3,4 -- "
+ cmd=("gemma-wrapper --json --loco 1,2,3,4 -- "
"-g /tmp/my-token/genofile.txt "
"-p /tmp/my-token/phenofile.txt "
"-a /tmp/my-token/snpfile.txt "
@@ -490,7 +490,7 @@ class GemmaAPITest(unittest.TestCase):
conn=_redis_conn,
email=None,
job_queue='GN3::job-queue',
- cmd=("gemma-wrapper --json --loco --input 1,2,3,4 -- "
+ cmd=("gemma-wrapper --json --loco 1,2,3,4 -- "
"-g /tmp/my-token/genofile.txt "
"-p /tmp/my-token/phenofile.txt "
"-a /tmp/my-token/snpfile.txt "