Merge branch 'main' of github.com:genenetwork/genenetwork3

1 files changed, 15 insertions, 0 deletions

diff --git a/sql/map-database.sh b/sql/map-database.sh
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+#! /bin/sh -e
+
+# This scripts visualizes schema.sql into schema.png and schema.svg. It uses
+# sqlt-graph from the perl-sql-transform package. Sadly, perl-sql-transform is
+# not packaged for Guix yet. We will likely deprecate this script in favor of
+# a custom scheme script that does not depend on perl-sql-transform.
+
+skip_tables=AvgMethod,CeleraINFO_mm6,Chr_Length,DatasetMapInvestigator,DatasetStatus,Dataset_mbat,EnsemblProbe,EnsemblProbeLocation,GORef,GeneCategory,GeneIDXRef,GeneList_rn3,GeneList_rn33,GeneMap_cuiyan,GeneRIFXRef,GenoCode,GenoFile,GenoSE,H2,InfoFiles,InfoFilesUser_md5,LCorrRamin3,RatSnpPattern,Sample,SampleXRef,SnpAllRat,SnpAllele_to_be_deleted,SnpPattern,SnpSource,Vlookup,metadata_audit,pubmedsearch,temporary
+
+clusters="Others=AccessLog,Docs,Investigators,MachineAccessLog,News,Organizations,TableComments,TableFieldAnnotation,User,UserPrivilege,login,role,roles_users,user,user_collection,user_openids"
+
+flags="--db MySQL --skip-tables $skip_tables --cluster $clusters"
+
+sqlt-graph $flags --output-type png --output schema.png schema.sql
+sqlt-graph $flags --output-type svg --output schema.svg schema.sql