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author | BonfaceKilz | 2021-09-28 11:21:07 +0300 |
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committer | GitHub | 2021-09-28 11:21:07 +0300 |
commit | 674dc56b9df38e7cf1bbc65a2fc6bf3cc16f7231 (patch) | |
tree | f35b34525843542aca50c4f22c6b62ca59d1a057 /scripts/output.json | |
parent | 0cbb6ecde0315b7d6f021cb17406f5e5197e8a05 (diff) | |
parent | 16235188d4ee2ad21a667832baf6cbbea6d8856a (diff) | |
download | genenetwork3-674dc56b9df38e7cf1bbc65a2fc6bf3cc16f7231.tar.gz |
Merge pull request #38 from genenetwork/feature/wgcna_analysis
script for wgcna analysis
Diffstat (limited to 'scripts/output.json')
-rw-r--r-- | scripts/output.json | 161 |
1 files changed, 161 insertions, 0 deletions
diff --git a/scripts/output.json b/scripts/output.json new file mode 100644 index 0000000..9caf837 --- /dev/null +++ b/scripts/output.json @@ -0,0 +1,161 @@ +{ + "ModEigens":{ + "MEturquoise":[ + 0.0646677768085351, + 0.137200224277058, + 0.63451113720732, + -0.544002665501479, + -0.489487590361863, + 0.197111117570427 + ] + }, + "soft_threshold":{ + "Power":[ + 1, + 2, + 3, + 4, + 5, + 6, + 7, + 8, + 9, + 10, + 12, + 14, + 16, + 18, + 20 + ], + "SFT.R.sq":[ + 0.0181093215847335, + 0.00011984142485113, + 0.000171967046945159, + 0.0105462010616537, + 0.0341444584348834, + 0.0687163726151286, + 0.0306423506274298, + 0.0492567394226327, + 0.0789539269997996, + 0.0944880158122527, + 0.122195040270446, + 0.0340768567186139, + 0.0625860126119281, + 0.100082257137014, + 0.128277841930818 + ], + "slope":[ + 3.81011386139005, + -0.170826531149538, + 0.159161787390082, + -1.01047981107833, + -1.55943531024794, + -1.93420125756514, + -1.16799247295814, + -1.33414063070555, + -1.54984944650438, + -1.54715757057087, + -1.49931213589121, + -1.80460140377151, + -2.19055343583319, + -2.52135805259606, + -2.58599487577447 + ], + "truncated.R.sq":[ + 0.768989700952805, + 0.522025793450566, + 0.329341226670409, + 0.110265719555879, + 0.0195649645183151, + -0.0503253079741786, + 0.0507498358330625, + -0.0129255450167765, + -0.035717519210676, + -0.0807094793662766, + -0.0967803564932559, + 0.00172686282662393, + -0.0340811003657508, + -0.0390284600100592, + -0.0489269837827069 + ], + "mean.k.":[ + 4.20178789454309, + 3.44556816856968, + 2.98532344074325, + 2.65297323828966, + 2.39517682414009, + 2.18846935370095, + 2.01963258852289, + 1.87999059876872, + 1.76335304166057, + 1.66510080962817, + 1.51038968360321, + 1.39583176924843, + 1.30882729664563, + 1.24120316437299, + 1.18753154238216 + ], + "median.k.":[ + 4.65733789933094, + 4.13585224131512, + 3.75980713552836, + 3.43775457512904, + 3.15305040369031, + 2.89933881967523, + 2.67225531456956, + 2.46825611568646, + 2.28437024155601, + 2.118086531192, + 1.83011067501282, + 1.59073325345641, + 1.38991168639473, + 1.2201000051609, + 1.07553194658444 + ], + "max.k.":[ + 4.81522245318686, + 4.21987143583501, + 3.83876962723542, + 3.55526976885104, + 3.32904938849614, + 3.14312441404036, + 2.98828051379132, + 2.85837136671219, + 2.74879840851137, + 2.65594228759455, + 2.50929962297015, + 2.40113981571731, + 2.31993775805391, + 2.25792900175825, + 2.2098218130451 + ] + }, + "blockGenes":[ + 1, + 2, + 3, + 4, + 5, + 6, + 7 + ], + "net_colors":{ + "X1":"turquoise", + "X2":"turquoise", + "X3":"turquoise", + "X4":"turquoise", + "X5":"turquoise", + "X6":"turquoise", + "X7":"turquoise" + }, + "net_unmerged":{ + "X1":"turquoise", + "X2":"turquoise", + "X3":"turquoise", + "X4":"turquoise", + "X5":"turquoise", + "X6":"turquoise", + "X7":"turquoise" + }, + "imageLoc":"/WGCNAoutput_1uujpTIpC.png" +}
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