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author | Muriithi Frederick Muriuki | 2021-09-08 06:52:01 +0300 |
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committer | Muriithi Frederick Muriuki | 2021-09-08 07:02:20 +0300 |
commit | 31ca02d1f095c2cc667e5b7d49131d702982f321 (patch) | |
tree | 734f3a379fac6f8648a9228fb6f89f30ea2952b9 /scripts/laminar | |
parent | d4943f1d01d89a3928c905f80914a23144126c8e (diff) | |
download | genenetwork3-31ca02d1f095c2cc667e5b7d49131d702982f321.tar.gz |
Fix the traits order computations for clustering
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/computations/heatmap.py: Fix ordering function * tests/unit/computations/test_heatmap.py: update test The order of the traits is important for the clustering algorithm, since the clustering seems to use the distance of one trait from another to determine how to order them. This commit also gets rid of the xoffset argument that is not important to the ordering, and was used in the older GN1 to determine how to draw the clustering lines.
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