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| author | Alexander Kabui | 2021-04-12 09:54:12 +0300 |
|---|---|---|
| committer | GitHub | 2021-04-12 09:54:12 +0300 |
| commit | 31ac939f58bf7b6d353ced995ca395376203b25f (patch) | |
| tree | 41770a0e4ec3441045fca9bc48de794e444b80ba /requirements.txt | |
| parent | 5151987063eab58b10a2dd8e831ec036df217531 (diff) | |
| download | genenetwork3-31ac939f58bf7b6d353ced995ca395376203b25f.tar.gz | |
Integrate correlation API
- add new api for gn2-gn3 sample r integration
- delete map for sample list to values
- add db util file
- add python msql-client dependency
- add db for fetching lit correlation results
- add unittests for db utils
- add tests for db_utils
- modify api for fetching lit correlation results
- refactor Mock Database Connector and unittests
- add sql url parser
- add SQL URI env variable
- refactor code for db utils
- modify return data for lit correlation
- refactor tissue correlation endpoint
- replace db_instance with conn
Diffstat (limited to 'requirements.txt')
| -rw-r--r-- | requirements.txt | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/requirements.txt b/requirements.txt index 4586f96..e581297 100644 --- a/requirements.txt +++ b/requirements.txt @@ -1,9 +1,12 @@ astroid==2.5 base58==2.1.0 bcrypt==3.1.7 +certifi==2020.12.5 cffi==1.14.5 +chardet==4.0.0 click==7.1.2 Flask==1.1.2 +idna==2.10 ipfshttpclient==0.7.0 isort==4.3.21 itsdangerous==1.1.0 @@ -14,16 +17,19 @@ mccabe==0.6.1 multiaddr==0.0.9 mypy==0.790 mypy-extensions==0.4.3 +mysqlclient==2.0.3 netaddr==0.8.0 numpy==1.20.1 pycparser==2.20 pylint==2.5.3 redis==3.5.3 +requests==2.25.1 scipy==1.6.0 six==1.15.0 toml==0.10.2 typed-ast==1.4.2 typing-extensions==3.7.4.3 +urllib3==1.26.4 varint==1.0.2 Werkzeug==1.0.1 wrapt==1.12.1 |