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authorFrederick Muriuki Muriithi2022-02-18 07:17:50 +0300
committerFrederick Muriuki Muriithi2022-02-18 07:17:50 +0300
commit83a7aa7533f8f4ecac049dc0e93aff6429e6e5ae (patch)
tree0d0e77acba6570a7362c1380fa606535bc90e216 /pytest.ini
parent12db8134081bc679565dfff1aaa2da81f913dd9d (diff)
downloadgenenetwork3-83a7aa7533f8f4ecac049dc0e93aff6429e6e5ae.tar.gz
Test partial correlations endpoint with non-existent primary traits
Test that the partial correlations endpoint responds with an appropriate
"not-found" message and the corresponding 404 status code in the case where a
request is made and the primary trait requested for does not exist in the
database.

Summary of the changes in each file:
* gn3/api/correlation.py: generalise the building of the response
* gn3/computations/partial_correlations.py: return with a "not-found" if the
  primary trait does not exist in the database
* gn3/db/partial_correlations.py: Fix a number of bugs that led to exceptions
  in the case that the primary trait did not exist
* pytest.ini: register a `slow` pytest marker
* tests/integration/test_partial_correlations.py: Add a new test to check for
  an appropriate 404 response in case of a primary trait that does not exist
  in the database.
Diffstat (limited to 'pytest.ini')
-rw-r--r--pytest.ini1
1 files changed, 1 insertions, 0 deletions
diff --git a/pytest.ini b/pytest.ini
index 58eba11..ba87787 100644
--- a/pytest.ini
+++ b/pytest.ini
@@ -1,6 +1,7 @@
 [pytest]
 addopts = --strict-markers
 markers =
+	slow
 	unit_test
 	integration_test
 	performance_test
\ No newline at end of file