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author | Alexander Kabui | 2021-04-12 09:54:12 +0300 |
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committer | GitHub | 2021-04-12 09:54:12 +0300 |
commit | 31ac939f58bf7b6d353ced995ca395376203b25f (patch) | |
tree | 41770a0e4ec3441045fca9bc48de794e444b80ba /guix.scm | |
parent | 5151987063eab58b10a2dd8e831ec036df217531 (diff) | |
download | genenetwork3-31ac939f58bf7b6d353ced995ca395376203b25f.tar.gz |
Integrate correlation API
- add new api for gn2-gn3 sample r integration
- delete map for sample list to values
- add db util file
- add python msql-client dependency
- add db for fetching lit correlation results
- add unittests for db utils
- add tests for db_utils
- modify api for fetching lit correlation results
- refactor Mock Database Connector and unittests
- add sql url parser
- add SQL URI env variable
- refactor code for db utils
- modify return data for lit correlation
- refactor tissue correlation endpoint
- replace db_instance with conn
Diffstat (limited to 'guix.scm')
-rw-r--r-- | guix.scm | 2 |
1 files changed, 1 insertions, 1 deletions
@@ -78,7 +78,7 @@ ("python-pylint" python-pylint) ("python-redis" ,python-redis) ("python-scipy" ,python-scipy) - ("python-scipy" ,python-scipy) + ("python-mysqlclient" ,python-mysqlclient) ("python-sqlalchemy-stubs" ,python-sqlalchemy-stubs))) (build-system python-build-system) (home-page "https://github.com/genenetwork/genenetwork3") |