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authorMuriithi Frederick Muriuki2021-08-08 11:06:35 +0300
committerMuriithi Frederick Muriuki2021-08-08 11:06:35 +0300
commit0ec39e6c5058f4f06bfb5f763f51cd9dc176cb35 (patch)
tree2c9ea26f67e2a451343f4003fb67478baeb17ec2 /guix.scm
parenta73d1ce388012758ce3b0d789f008e4184e6a38e (diff)
parente0476d51603432f60b6412b65486166deabe9e08 (diff)
downloadgenenetwork3-0ec39e6c5058f4f06bfb5f763f51cd9dc176cb35.tar.gz
Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decompose_db_retrieval
Diffstat (limited to 'guix.scm')
-rw-r--r--guix.scm14
1 files changed, 13 insertions, 1 deletions
diff --git a/guix.scm b/guix.scm
index efef9c1..f94fe1a 100644
--- a/guix.scm
+++ b/guix.scm
@@ -17,6 +17,17 @@
 ;;; You should have received a copy of the GNU General Public License
 ;;; along with genenetwork3. If not, see https://www.gnu.org/licenses/.
 
+;; To use this file to build HEAD of gemma:
+;;
+;;   env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ guix build -f guix.scm
+;;
+;; After checking out the git repo
+;;   cd ~ ; git clone https://git.genenetwork.org/guix-bioinformatics/guix-bioinformatics
+;;
+;; To get a development container (e.g., run in emacs shell).
+;;
+;;   env GUIX_PACKAGE_PATH=~/guix-bioinformatics/ guix environment -C -l guix.scm
+
 (use-modules
  (srfi srfi-1)
  (srfi srfi-26)
@@ -71,8 +82,9 @@
                       #:recursive? #t
                       #:select? git-file?))
   (propagated-inputs `(("coreutils" ,coreutils)
-                       ("gemma-wrapper" ,gemma-wrapper)
                        ("csvdiff" ,go-github-com-aswinkarthik-csvdiff)
+                       ("gemma-wrapper" ,gemma-wrapper)
+                       ("gunicorn" ,gunicorn)
                        ("python" ,python-wrapper)
                        ("python-bcrypt" ,python-bcrypt)
                        ("python-flask" ,python-flask)