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| author | Munyoki Kilyungi | 2024-01-04 21:02:55 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2024-01-06 14:15:26 +0300 |
| commit | 716c9e0f1444267bbd99c5fe1cac4729a9643c7e (patch) | |
| tree | b83cdab342c99977bf20717c50dfbd744ee348d2 /gn3 | |
| parent | de072fd7248c8b1fe3a9c40a0309bfbc1655ac8b (diff) | |
| download | genenetwork3-716c9e0f1444267bbd99c5fe1cac4729a9643c7e.tar.gz | |
Remove extra gene metadata from query as it's un-necessary.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/api/metadata.py | 9 |
1 files changed, 4 insertions, 5 deletions
diff --git a/gn3/api/metadata.py b/gn3/api/metadata.py index 11f9f46..b3caa11 100644 --- a/gn3/api/metadata.py +++ b/gn3/api/metadata.py @@ -904,9 +904,8 @@ $prefix CONSTRUCT { ?probeset ?predicate ?object ; - gnt:geneSymbol ?gene ; - dct:references ?probesetResource . - ?gene ?genePred ?geneObj . + dct:references ?probesetResource ; + dct:references ?resource . ?resource rdfs:label ?resourceLabel ; rdfs:comments ?resourceComments . ?probesetResource rdfs:label ?probesetResourceLabel ; @@ -916,11 +915,11 @@ CONSTRUCT { ?probeset rdf:type gnc:Probeset ; rdfs:label "$name" ; ?predicate ?object . + FILTER (!regex(str(?genePred), '(geneSymbol)', 'i')) . OPTIONAL { ?probeset gnt:geneSymbol ?symbolName . ?gene gnt:geneSymbol ?symbolName ; - rdf:type gnc:Gene ; - ?genePred ?geneObj . + rdf:type gnc:Gene . ?resource ^dct:references ?gene ; a ?resourceLink . ?resourceLink rdfs:Class gnc:ResourceLink ; |