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authorFrederick Muriuki Muriithi2021-10-29 08:38:48 +0300
committerBonfaceKilz2021-11-04 12:45:57 +0300
commitfed4c481eceb0ce464deee6262b96676eb869ad3 (patch)
treedcc72ad1449cdd866e3311185b09283006b3e167 /gn3
parent9ceb958273b8d86d220fa0d2f040fcb4a8233586 (diff)
downloadgenenetwork3-fed4c481eceb0ce464deee6262b96676eb869ad3.tar.gz
Specify ten (10) decimal places
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * gn3/computations/partial_correlations.py: specify 10 decimal places * tests/unit/computations/test_partial_correlations.py: update examples Slight differences in python implementations, possibly hardware and operating systems could cause the value of float (double) values to be different in the less significant parts of the decimal places. This commit limits the usable part of the decimals to the first 10 decimal places for now.
Diffstat (limited to 'gn3')
-rw-r--r--gn3/computations/partial_correlations.py4
1 files changed, 3 insertions, 1 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py
index fce6ad2..8a00931 100644
--- a/gn3/computations/partial_correlations.py
+++ b/gn3/computations/partial_correlations.py
@@ -148,7 +148,9 @@ def tissue_correlation(
assert method in method_fns.keys(), (
"Method must be one of: {}".format(",".join(method_fns.keys())))
- return method_fns[method](primary_trait_values, target_trait_values)
+ return tuple(
+ round(n, 10) for n in
+ method_fns[method](primary_trait_values, target_trait_values))
def batch_computed_tissue_correlation(
primary_trait_values: Tuple[float, ...], target_traits_dict: dict,