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| author | zsloan | 2021-08-28 00:46:10 +0000 |
|---|---|---|
| committer | zsloan | 2022-03-22 19:08:01 +0000 |
| commit | 64aedf4202efc4e50648d496d2a8eed3fc828b2f (patch) | |
| tree | 3345049899767d429d1585fcd98511d8cee0a7b9 /gn3 | |
| parent | 40e85090b60ef002723b614fd712b6affbd68176 (diff) | |
| download | genenetwork3-64aedf4202efc4e50648d496d2a8eed3fc828b2f.tar.gz | |
Fix issue that causes R/qtl to always run pair-scan even if pair-scan isn't selected
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/api/rqtl.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/api/rqtl.py b/gn3/api/rqtl.py index 9aab9fa..b6c04eb 100644 --- a/gn3/api/rqtl.py +++ b/gn3/api/rqtl.py @@ -48,7 +48,7 @@ run the rqtl_wrapper script and return the results as JSON "output", rqtl_cmd.get('output_file'))): os.system(rqtl_cmd.get('rqtl_cmd')) - if "pairscan" in boolean_kwargs: + if "pairscan" in rqtl_bool_kwargs: rqtl_output['results'] = process_rqtl_pairscan(rqtl_cmd.get('output_file'), genofile) else: rqtl_output['results'] = process_rqtl_mapping(rqtl_cmd.get('output_file')) |