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author | Alexander Kabui | 2021-11-29 00:28:42 +0300 |
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committer | BonfaceKilz | 2021-12-10 09:58:29 +0300 |
commit | 9fa90438672f7a96740a489f2b2fc3f2b32a99b0 (patch) | |
tree | 7a38d6dcb7a38149767ac6e50f52d3a06fa5419e /gn3 | |
parent | bc1b310503d63555ffe9d2da0a881f11b666fa3b (diff) | |
download | genenetwork3-9fa90438672f7a96740a489f2b2fc3f2b32a99b0.tar.gz |
update function docs for normalizing strain values
Diffstat (limited to 'gn3')
-rw-r--r-- | gn3/computations/correlations.py | 15 |
1 files changed, 5 insertions, 10 deletions
diff --git a/gn3/computations/correlations.py b/gn3/computations/correlations.py index 2f79c4a..1f90b6c 100644 --- a/gn3/computations/correlations.py +++ b/gn3/computations/correlations.py @@ -38,18 +38,13 @@ def map_shared_keys_to_values(target_sample_keys: List, return target_dataset_data -def normalize_values(a_values: List, - b_values: List) -> Tuple[List[float], List[float], int]: - """Trim two lists of values to contain only the values they both share Given - two lists of sample values, trim each list so that it contains only the - samples that contain a value in both lists. Also returns the number of - such samples. - - >>> normalize_values([2.3, None, None, 3.2, 4.1, 5], - [3.4, 7.2, 1.3, None, 6.2, 4.1]) - ([2.3, 4.1, 5], [3.4, 6.2, 4.1], 3) +def normalize_values(a_values: List,b_values: List): + """ + input:nested two list of primary and target values *includes None vals + output: yield two list of normalized values elimate if none """ + for a_val, b_val in zip(a_values, b_values): if (a_val and b_val is not None): yield a_val, b_val |