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| author | BonfaceKilz | 2022-01-04 17:02:05 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2022-01-04 17:04:28 +0300 |
| commit | 2d6a6f3cffc93718d405ab9c88c305fb44fd1752 (patch) | |
| tree | 236d9bd8ca7c35234c79ca362274c7a9e4332d1a /gn3 | |
| parent | 1acd3873f44e0edff055c07fbb6d11066920f379 (diff) | |
| download | genenetwork3-2d6a6f3cffc93718d405ab9c88c305fb44fd1752.tar.gz | |
traits.py: Don't use "value" to check if a record exists
The problem with using the "value" record is that it's a floating point
number. See
<https://www.bonfacemunyoki.com/post/2021-10-21-comparing-floating-point-numbers/>
on why comparing floating point numbers can be an issue.
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/db/traits.py | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/gn3/db/traits.py b/gn3/db/traits.py index 2cab94e..338b320 100644 --- a/gn3/db/traits.py +++ b/gn3/db/traits.py @@ -110,7 +110,6 @@ def get_trait_csv_sample_data(conn: Any, def update_sample_data(conn: Any, #pylint: disable=[R0913] - trait_name: str, strain_name: str, phenotype_id: int, @@ -261,8 +260,8 @@ def insert_sample_data(conn: Any, #pylint: disable=[R0913] # Return early if an insert already exists! cursor.execute("SELECT Id FROM PublishData where Id = %s " - "AND StrainId = %s AND value = %s ", - (data_id, strain_id, value)) + "AND StrainId = %s", + (data_id, strain_id)) if cursor.fetchone(): # This strain already exists return (0, 0, 0) |