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authorBonfaceKilz2022-04-12 13:24:08 +0300
committerBonfaceKilz2022-04-12 13:26:57 +0300
commit39afc680ea3eac81a2e5fff763c1cd1a51156bb5 (patch)
treed3be1a727d9563fd007210fad42f269846c17a69 /gn3
parent789d483fe8877c08a07d0f94cb22e3e33a5888bc (diff)
downloadgenenetwork3-39afc680ea3eac81a2e5fff763c1cd1a51156bb5.tar.gz
Delete "get_allowable_sampledata_headers"
* gn3/csvcmp.py (get_allowable_sampledata_headers): Delete it. * tests/unit/test_csvcmp.py: Remove "get_allowable_sampledata_headers" import. (test_get_allowable_csv_headers): Delete it.
Diffstat (limited to 'gn3')
-rw-r--r--gn3/csvcmp.py9
1 files changed, 0 insertions, 9 deletions
diff --git a/gn3/csvcmp.py b/gn3/csvcmp.py
index 6ad84ef..24cbee0 100644
--- a/gn3/csvcmp.py
+++ b/gn3/csvcmp.py
@@ -123,15 +123,6 @@ def fill_csv(csv_text, width, value="x"):
return "\n".join(data)
-def get_allowable_sampledata_headers(conn: Any) -> List:
- """Get a list of all the case-attributes stored in the database"""
- attributes = ["Strain Name", "Value", "SE", "Count"]
- with conn.cursor() as cursor:
- cursor.execute("SELECT Name from CaseAttribute")
- attributes += [attributes[0] for attributes in cursor.fetchall()]
- return attributes
-
-
def extract_invalid_csv_headers(allowed_headers: List, csv_text: str) -> List:
"""Check whether a csv text's columns contains valid headers"""
csv_header = []