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author | Frederick Muriuki Muriithi | 2021-11-09 10:06:01 +0300 |
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committer | Frederick Muriuki Muriithi | 2021-11-09 10:06:01 +0300 |
commit | d9ea8744e04d891d1d13c710e24a0a7c85127140 (patch) | |
tree | 9168713bdc58708378e4802fff09af78666729b5 /gn3 | |
parent | 9b590d894f1e68ca5d7d00cb6d268f7fb6e6730c (diff) | |
download | genenetwork3-d9ea8744e04d891d1d13c710e24a0a7c85127140.tar.gz |
Add new data processing utility
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi
* gn3/data_helpers.py: New function (`partition_by`)
* tests/unit/test_data_helpers.py: Tests for new function
Add a function that approximates Clojure's `partition-by` function, to help
with processing the data in a more functional way.
Diffstat (limited to 'gn3')
-rw-r--r-- | gn3/data_helpers.py | 15 |
1 files changed, 15 insertions, 0 deletions
diff --git a/gn3/data_helpers.py b/gn3/data_helpers.py index d3f942b..b72fbc5 100644 --- a/gn3/data_helpers.py +++ b/gn3/data_helpers.py @@ -24,6 +24,21 @@ def partition_all(num: int, items: Sequence[Any]) -> Tuple[Tuple[Any, ...], ...] in reduce( __compute_start_stop__, iterations, tuple())]) +def partition_by(partition_fn, items): + """ + Given a sequence `items`, return a tuple of tuples, each of which contain + the values in `items` partitioned such that the first item in each internal + tuple, when passed to `partition_function` returns True. + + This is an approximation of Clojure's `partition-by` function. + """ + def __partitioner__(accumulator, item): + if partition_fn(item): + return accumulator + ((item,),) + return accumulator[:-1] + (accumulator[-1] + (item,),) + + return reduce(__partitioner__, items, tuple()) + def parse_csv_line( line: str, delimiter: str = ",", quoting: Optional[str] = '"') -> Tuple[str, ...]: |