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| author | Alexander Kabui | 2021-04-12 09:54:12 +0300 |
|---|---|---|
| committer | GitHub | 2021-04-12 09:54:12 +0300 |
| commit | 31ac939f58bf7b6d353ced995ca395376203b25f (patch) | |
| tree | 41770a0e4ec3441045fca9bc48de794e444b80ba /gn3/settings.py | |
| parent | 5151987063eab58b10a2dd8e831ec036df217531 (diff) | |
| download | genenetwork3-31ac939f58bf7b6d353ced995ca395376203b25f.tar.gz | |
Integrate correlation API
- add new api for gn2-gn3 sample r integration
- delete map for sample list to values
- add db util file
- add python msql-client dependency
- add db for fetching lit correlation results
- add unittests for db utils
- add tests for db_utils
- modify api for fetching lit correlation results
- refactor Mock Database Connector and unittests
- add sql url parser
- add SQL URI env variable
- refactor code for db utils
- modify return data for lit correlation
- refactor tissue correlation endpoint
- replace db_instance with conn
Diffstat (limited to 'gn3/settings.py')
| -rw-r--r-- | gn3/settings.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/settings.py b/gn3/settings.py index 2836581..e77a977 100644 --- a/gn3/settings.py +++ b/gn3/settings.py @@ -12,6 +12,6 @@ REDIS_JOB_QUEUE = "GN3::job-queue" TMPDIR = os.environ.get("TMPDIR", tempfile.gettempdir()) # SQL confs -SQLALCHEMY_DATABASE_URI = "mysql://kabui:1234@localhost/test" +SQL_URI = os.environ.get("SQL_URI", "mysql://kabui:1234@localhost/db_webqtl") SECRET_KEY = "password" SQLALCHEMY_TRACK_MODIFICATIONS = False |