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| author | Frederick Muriuki Muriithi | 2021-11-12 04:07:42 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2021-11-12 04:07:42 +0300 |
| commit | d1617bd8af25bf7c7777be7a634559fd31b491ad (patch) | |
| tree | 9565d4fcca4fa553dc21a9543353a8b29357ab4a /gn3/heatmaps.py | |
| parent | d895eea22ab908c11f4ebb77f99518367879b1f6 (diff) | |
| parent | 85405fe6875358d3bb98b03621271d5909dd393f (diff) | |
| download | genenetwork3-d1617bd8af25bf7c7777be7a634559fd31b491ad.tar.gz | |
Merge branch 'main' of github.com:genenetwork/genenetwork3 into partial-correlations
Diffstat (limited to 'gn3/heatmaps.py')
| -rw-r--r-- | gn3/heatmaps.py | 6 |
1 files changed, 1 insertions, 5 deletions
diff --git a/gn3/heatmaps.py b/gn3/heatmaps.py index bf9dfd1..f0af409 100644 --- a/gn3/heatmaps.py +++ b/gn3/heatmaps.py @@ -64,11 +64,7 @@ def cluster_traits(traits_data_list: Sequence[Dict]): def __compute_corr(tdata_i, tdata_j): if tdata_i[0] == tdata_j[0]: return 0.0 - corr_vals = compute_correlation(tdata_i[1], tdata_j[1]) - corr = corr_vals[0] - if (1 - corr) < 0: - return 0.0 - return 1 - corr + return 1 - compute_correlation(tdata_i[1], tdata_j[1])[0] def __cluster(tdata_i): return tuple( |