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| author | Frederick Muriuki Muriithi | 2021-09-27 05:02:09 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2021-09-27 05:02:09 +0300 |
| commit | 1d09a9222f8c661da3abd6d61c09ae19eeb5d793 (patch) | |
| tree | 2e698f83d28ae44e0498605dbc3c19ce14c02a6d /gn3/heatmaps.py | |
| parent | 19783a18c2bc7941fc5980e593f19fb1d18c3623 (diff) | |
| download | genenetwork3-1d09a9222f8c661da3abd6d61c09ae19eeb5d793.tar.gz | |
Update terminology: `riset` to `group`
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
* Update terminology to use the appropriate domain terminology according to
Zachary's direction at
https://github.com/genenetwork/genenetwork3/pull/37#issuecomment-926041744
Diffstat (limited to 'gn3/heatmaps.py')
| -rw-r--r-- | gn3/heatmaps.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/heatmaps.py b/gn3/heatmaps.py index b6fc6d3..a36940d 100644 --- a/gn3/heatmaps.py +++ b/gn3/heatmaps.py @@ -164,7 +164,7 @@ def build_heatmap(traits_names, conn: Any): retrieve_trait_info(threshold, fullname, conn) for fullname in traits_names] traits_data_list = [retrieve_trait_data(t, conn) for t in traits] - genotype_filename = build_genotype_file(traits[0]["riset"]) + genotype_filename = build_genotype_file(traits[0]["group"]) samples = load_genotype_samples(genotype_filename) exported_traits_data_list = [ export_trait_data(td, samples) for td in traits_data_list] |