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authorFrederick Muriuki Muriithi2021-12-09 06:25:10 +0300
committerFrederick Muriuki Muriithi2021-12-09 09:19:57 +0300
commitc5f78421c50dc7c9e4801ad7bf9583674c29e1ba (patch)
tree46bde68b01a1d56117516d51b39143dbee4b07c8 /gn3/db
parentdd55b1376cbff6c9870b3173f8dc6207505a57c6 (diff)
downloadgenenetwork3-c5f78421c50dc7c9e4801ad7bf9583674c29e1ba.tar.gz
Prevent error on no result. Fix indexing
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * If the dataset name is not found, don't cause an exception, instead, return the provided search name. * Use the correct inner object
Diffstat (limited to 'gn3/db')
-rw-r--r--gn3/db/datasets.py11
1 files changed, 7 insertions, 4 deletions
diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py
index e4c779a..c50e148 100644
--- a/gn3/db/datasets.py
+++ b/gn3/db/datasets.py
@@ -26,10 +26,13 @@ def retrieve_probeset_trait_dataset_name(
"threshold": threshold,
"name": name
})
- return dict(zip(
- ["dataset_id", "dataset_name", "dataset_fullname",
- "dataset_shortname", "dataset_datascale"],
- cursor.fetchone()))
+ res = cursor.fetchone()
+ if res:
+ return dict(zip(
+ ["dataset_id", "dataset_name", "dataset_fullname",
+ "dataset_shortname", "dataset_datascale"],
+ res))
+ return {"dataset_id": None, "dataset_name": name, "dataset_fullname": name}
def retrieve_publish_trait_dataset_name(
threshold: int, name: str, connection: Any):