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author | Muriithi Frederick Muriuki | 2021-08-04 10:05:33 +0300 |
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committer | Muriithi Frederick Muriuki | 2021-08-04 10:05:33 +0300 |
commit | 53a8b6aa977bc6c051625a812009184f78da597d (patch) | |
tree | 9df0cba64ee88b445568e78c204475c46fcbd719 /gn3/db | |
parent | 7ab35adb5afb242092e25763474c747e267ded81 (diff) | |
download | genenetwork3-53a8b6aa977bc6c051625a812009184f78da597d.tar.gz |
Add tests for post-processing functions
Issues:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
* Add missing tests for some post-processing functions
Diffstat (limited to 'gn3/db')
-rw-r--r-- | gn3/db/traits.py | 13 |
1 files changed, 8 insertions, 5 deletions
diff --git a/gn3/db/traits.py b/gn3/db/traits.py index 902eb8b..ce6298f 100644 --- a/gn3/db/traits.py +++ b/gn3/db/traits.py @@ -160,11 +160,14 @@ def set_confidential_field(trait_info): """Post processing function for 'Publish' trait types. It sets the value for the 'confidential' key.""" - return { - **trait_info, - "confidential": 1 if ( - trait_info.get("pre_publication_description", None) - and not trait_info.get("pubmed_id", None)) else 0} + if trait_info["type"] == "Publish": + return { + **trait_info, + "confidential": 1 if ( + trait_info.get("pre_publication_description", None) + and not trait_info.get("pubmed_id", None)) else 0} + else: + return trait_info def retrieve_probeset_trait_info(trait_data_source: Dict[str, Any], conn: Any): """Retrieve trait information for type `ProbeSet` traits. |