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| author | Frederick Muriuki Muriithi | 2021-10-29 08:48:16 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2021-10-29 08:48:16 +0300 |
| commit | bfe73a913836395fbcebea442e3118e73ac9255f (patch) | |
| tree | b623e3d81fb87331fceb0a33647217a7c6e94cc6 /gn3/computations | |
| parent | 116006464a61edcfa354b729ea40a7af28c08d61 (diff) | |
| download | genenetwork3-bfe73a913836395fbcebea442e3118e73ac9255f.tar.gz | |
Explicitly round the values
* Explicitly round the values to prevent issues with the type-checker
Diffstat (limited to 'gn3/computations')
| -rw-r--r-- | gn3/computations/partial_correlations.py | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py index 8a00931..151143a 100644 --- a/gn3/computations/partial_correlations.py +++ b/gn3/computations/partial_correlations.py @@ -148,9 +148,8 @@ def tissue_correlation( assert method in method_fns.keys(), ( "Method must be one of: {}".format(",".join(method_fns.keys()))) - return tuple( - round(n, 10) for n in - method_fns[method](primary_trait_values, target_trait_values)) + corr, pvalue = method_fns[method](primary_trait_values, target_trait_values) + return (round(corr, 10), round(pvalue, 10)) def batch_computed_tissue_correlation( primary_trait_values: Tuple[float, ...], target_traits_dict: dict, |