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| author | Alexander Kabui | 2021-05-12 19:52:21 +0300 |
|---|---|---|
| committer | Alexander Kabui | 2021-05-12 19:52:21 +0300 |
| commit | 9215c0d412bd885db3c3bbcb5635c22ac932b6f4 (patch) | |
| tree | 9fa10dec7551169ebea7059caadfa372f53e3cba /gn3/computations | |
| parent | f88a2c3161c71d58c91c3030bd303a86846c5a73 (diff) | |
| download | genenetwork3-9215c0d412bd885db3c3bbcb5635c22ac932b6f4.tar.gz | |
rename lit_correlation_for_trait_list to lit_correlation_for_trait
Diffstat (limited to 'gn3/computations')
| -rw-r--r-- | gn3/computations/correlations.py | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/gn3/computations/correlations.py b/gn3/computations/correlations.py index 21bc82e..2a4854b 100644 --- a/gn3/computations/correlations.py +++ b/gn3/computations/correlations.py @@ -287,7 +287,7 @@ def fetch_lit_correlation_data( return (gene_id, 0) -def lit_correlation_for_trait_list( +def lit_correlation_for_trait( conn, target_trait_lists: List, species: Optional[str] = None, @@ -361,9 +361,9 @@ def map_to_mouse_gene_id(conn, species: Optional[str], def compute_all_lit_correlation(conn, trait_lists: List, species: str, gene_id): """Function that acts as an abstraction for - lit_correlation_for_trait_list""" + lit_correlation_for_trait""" - lit_results = lit_correlation_for_trait_list( + lit_results = lit_correlation_for_trait( conn=conn, target_trait_lists=trait_lists, species=species, |